Tero Aittokallio

C-SPADE: a web-tool for interactive analysis and visualization of drug screening experiments through compound-specific bioactivity dendrograms (2017)

Nucleic Acids Research

Belaguru Ravikumar, Zaid Alam, Gopal Peddinti, Tero Aittokallio

(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))

A community challenge for inferring genetic predictors of gene essentialities through analysis of a functional screen of cancer cell lines (2017)

Cell Systems

Gönen M, Weir Ba, Cowley GS, Vazquez F, Guan Y, Jaiswal A, Karasuyama M, Uzunangelov V, Wang T, Tsherniak A, Howell S, Marbach D, Hoff B, Norman TC, Airola A, Bivol A, Bunte K, Carlin D, Chopra S, Deran A, Ellrott K, Gopalacharyulu P, Graim K, Kaski S, Khan SA, Newton Y, Ng S, Pahikkala T, Paull E, Sokolov A, Tang H, Tang J, Wennerberg K, Xie Y, Zhan X, Zhu F, Aittokallio T, Mamitsuka H, Stuart JM, Boehm JS, Root DE, Xiao G, Stolovitzky G, Hahn WC, Margolin AA

(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))

Systematic drug sensitivity testing reveals synergistic growth inhibition by dasatinib or mTOR inhibitors with paclitaxel in ovarian granulosa cell tumor cells (2017)

Gynecologic Oncology

Haltia UM, Andersson N, Yadav B, Farkkila A, Kulesskiy E, Kankainen M, Tang J, Butzow R, Riska A, Leminen A, Heikinheimo M, Kallioniemi O, Unkila-Kallio L, Wennerberg K, Aittokallio T, Anttonen M

(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))

Rapalogs can promote cancer cell stemness in vitro in a Galectin-1 and H-ras-dependent manner (2017)

Oncotarget

Itziar M.D. Posada, Benoit Lectez, Mukund Sharma, Christina Oetken-Lindholm, Laxman Yetukuri, Yong Zhou, Tero Aittokallio, Daniel Abankwa

(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))

Systematic identification of feature combinations for predicting drug response with Bayesian multi-view multi-task linear regression (2017)

Bioinformatics

Ammad-Ud-Din M, Khan SA, Wennerberg K, Aittokallio T

(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))

Computational-experimental approach to drug-target interaction mapping: A case study on kinase inhibitors (2017)

PLoS Computational Biology

Cichonska A, Ravikumar B, Parri E, Timonen S, Pahikkala T, Airola A, Wennerberg K, Rousu J, Aittokallio T

(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))

Orphan G protein-coupled receptor GPRC5A modulates integrin β1-mediated epithelial cell adhesion (2017)

Cell Adhesion and Migration

Daria R. Bulanova, Yevhen A. Akimov, Anne Rokka, Teemu D. Laajala, Tero Aittokallio, Petri Kouvonen, Teijo Pellinen, Sergey G. Kuznetsov

(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))

Seed-effect modeling improves the consistency of genome-wide loss-of-function screens and identifies synthetic lethal vulnerabilities in cancer cells (2017)

Genome Medicine

Jaiswal Alok, Peddinti Gopal, Akimov Yevhen, Wennerberg Krister, Kuznetsov Sergey, Tang Jing, Aittokallio Tero

(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))

Early metabolic markers identify potential targets for the prevention of type 2 diabetes (2017)

Diabetologia

Peddinti G, Cobb J, Yengo L, Froguel P, Kravic J, Balkau B, Tuomi T, Aittokallio T, Groop L

(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))

Prediction of overall survival for patients with metastatic castration-resistant prostate cancer: development of a prognostic model through a crowdsourced challenge with open clinical trial data (2017)

Lancet Oncology

Guinney J, Wang T, Laajala TD, Winner KK, Bare JC, Neto EC, Khan SA, Peddinti G, Airola A, Pahikkala T, Mirtti T, Yu T, Bot BM, Shen L, Abdallah K, Norman T, Friend S, Stolovitzky G, Soule H, Sweeney CJ, Ryan CJ, Scher HI, Sartor O, Xie Y, Aittokallio T, Zhou FL, Costello JC, and the Prostate Cancer Challenge DREAM Community

(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))

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C-SPADE: a web-tool for interactive analysis and visualization of drug screening experiments through compound-specific bioactivity dendrograms (2017)

A community challenge for inferring genetic predictors of gene essentialities through analysis of a functional screen of cancer cell lines (2017)

Systematic drug sensitivity testing reveals synergistic growth inhibition by dasatinib or mTOR inhibitors with paclitaxel in ovarian granulosa cell tumor cells (2017)

Rapalogs can promote cancer cell stemness in vitro in a Galectin-1 and H-ras-dependent manner (2017)

Systematic identification of feature combinations for predicting drug response with Bayesian multi-view multi-task linear regression (2017)

Computational-experimental approach to drug-target interaction mapping: A case study on kinase inhibitors (2017)

Orphan G protein-coupled receptor GPRC5A modulates integrin β1-mediated epithelial cell adhesion (2017)

Seed-effect modeling improves the consistency of genome-wide loss-of-function screens and identifies synthetic lethal vulnerabilities in cancer cells (2017)

Early metabolic markers identify potential targets for the prevention of type 2 diabetes (2017)

Prediction of overall survival for patients with metastatic castration-resistant prostate cancer: development of a prognostic model through a crowdsourced challenge with open clinical trial data (2017)