Riikka
Ihalin
Docent, Department of Life Technologies
PhD
Areas of expertise
Oral microbiology
biofilms
Aggregatibacter actinomycetemcomitans
interkingdom signalling
molecular microbiology
Research
Background
In natural environment, bacteria form communities, biofilms, on surfaces. In biofilms, bacteria are more resistant than their planktonic forms to antimicrobials and host defense factors. Reasons for biofilm resistance to external forces include a protective extracellular matrix and formation of non-dividing persister cells. In humans, bacterial biofilms cause chronic infections. One of common biofilm diseases in humans is periodontitis, a persistent multispecies infection triggering chronic inflammation in tooth-supporting tissues. Periodontitis is characterized by active and less active phases in inflammation and tissue destruction suggesting that there might be certain type of pathogen-host crosstalk. It has been suggested that bacteria growing in biofilms could exploit proinflammatory cytokines produced by the host. Thus cytokine network aimed to enhance the clearance of pathogens might actually promote bacterial survival in protective biofilm.Research
Our research is focused on studying biofilm-host interaction in chronic infection, periodontitis. We use Aggregatibacter actinomycetemcomitans (Aa), a major pathogen in aggressive periodontitis, as model bacterium. In particular we are interested how the outer membrane proteins are involved in sensing the host response in inflammation. The research include molecular- and structural biology methods, flow cytometry and electron microscopy. In addition, we study the biofilm-host interaction by using cell culture model which mimics the gingival tissue.Publications
Deletion of competence genes represses expression of genes associated with anaerobic respiration/metabolism in Aggregatibacter actinomycetemcomitans (2023)
bioRxiv
(O2 Muu julkaisu )
Satamalaiturin liikuntasaumojen välisen lohkon kantavien rakenteiden mitoitus (The structural design of the load-bearing structures of a Finnish pier) (2022)
(Ammattikorkeakoulututkinnon opinnäytetyö, kandidaatintyö (G1))Pilus PilA of the naturally competent HACEK group pathogen Aggregatibacter actinomycetemcomitans stimulates human leukocytes and interacts with both DNA and proinflammatory cytokines (2022)
Microbial Pathogenesis
(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))
Decreased temperature increases the expression of a disordered bacterial late embryogenesis abundant (LEA) protein that enhances natural transformation (2021)
Virulence
(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))
Dispersion from C^alpha or N^H: 4D experiments for backbone resonance assignment of intrinsically disordered proteins (2020)
Journal of Biomolecular NMR
(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))
Virulence and Pathogenicity Properties of Aggregatibacter actinomycetemcomitans (2019)
Pathogens
(Vertaisarvioitu katsausartikkeli tieteellisessä aikakauslehdessä (A2))
Transcriptomic Analysis of Aggregatibacter actinomycetemcomitans Core and Accessory Genes in Different Growth Conditions (2019)
Pathogens
(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))
Aggregatibacter actinomycetemcomitans LPS binds human interleukin-8 (2019)
Journal of Oral Microbiology
(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))
Aggregatibacter actinomycetemcomitans Biofilm Reduces Gingival Epithelial Cell Keratin Expression in an Organotypic Gingival Tissue Culture Model (2019)
Pathogens
(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))
Interactions between the Aggregatibacter actinomycetemcomitans secretin HofQ and host cytokines indicate a link between natural competence and interleukin-8 uptake (2018)
Virulence
(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))