Deepankar Chakroborty profile picture
Deepankar
Chakroborty
Institute of Biomedicine
MSc

Contact

+358 29 450 3786
Tykistökatu 6
20520
Turku

Areas of expertise

Epidermal Growth Factor Receptor (EGFR), EGFR family
Receptor Tyrosine Kinases
Tyrosine Kinase inhibitors
Cancer
Cancer Biology
Bioinformatics
Functional Genomics
R statistical programming
Therapeutic resistance
High -throughput screen

Biography

I am a Doctoral student in the Turku Doctoral Programme of Molecular Medicine. I have a background in biotechnology and bioinformatics. Currently, I am pursuing my PhD under the joint supervision of Prof. Klaus Elenius and Dr. Laura Elo.

Research

Efforts of functional characterization of cancer-associated somatic mutations in oncogenes have been largely incomprehensive because they do not encompass the large majority. I have developed a pipeline to analyze thousands of variants of an oncogenic kinase gene in a single assay, I call iSCREAM (in vitro SCReen for Activating Mutation). We are developing the iSCREAM workflow to preemptively identify and characterize on-target secondary mutations that can cause therapeutic resistance, and then subsequently identify therapies that would potentially work for those resistant mutations.

Publications

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